End of training

README.md

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+---
+library_name: transformers
+license: apache-2.0
+base_model: bert-base-uncased
+tags:
+- generated_from_trainer
+metrics:
+- precision
+- recall
+- f1
+- accuracy
+model-index:
+- name: bert-base-uncased-finetuned-ner-biobert
+  results: []
+---
+
+<!-- This model card has been generated automatically according to the information the Trainer had access to. You
+should probably proofread and complete it, then remove this comment. -->
+
+# bert-base-uncased-finetuned-ner-biobert
+
+This model is a fine-tuned version of [bert-base-uncased](https://huggingface.co/bert-base-uncased) on an unknown dataset.
+It achieves the following results on the evaluation set:
+- Loss: 0.1121
+- Precision: 0.9407
+- Recall: 0.9660
+- F1: 0.9532
+- Accuracy: 0.9766
+
+## Model description
+
+More information needed
+
+## Intended uses & limitations
+
+More information needed
+
+## Training and evaluation data
+
+More information needed
+
+## Training procedure
+
+### Training hyperparameters
+
+The following hyperparameters were used during training:
+- learning_rate: 2e-05
+- train_batch_size: 16
+- eval_batch_size: 16
+- seed: 42
+- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
+- lr_scheduler_type: linear
+- num_epochs: 10
+
+### Training results
+
+| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1     | Accuracy |
+|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
+| 0.4588        | 1.0   | 612  | 0.1165          | 0.9356    | 0.9418 | 0.9387 | 0.9697   |
+| 0.1382        | 2.0   | 1224 | 0.1096          | 0.9245    | 0.9700 | 0.9467 | 0.9727   |
+| 0.0931        | 3.0   | 1836 | 0.0979          | 0.9390    | 0.9655 | 0.9521 | 0.9762   |
+| 0.0753        | 4.0   | 2448 | 0.0981          | 0.9398    | 0.9708 | 0.9550 | 0.9763   |
+| 0.0544        | 5.0   | 3060 | 0.0975          | 0.9415    | 0.9691 | 0.9551 | 0.9770   |
+| 0.0478        | 6.0   | 3672 | 0.1066          | 0.9364    | 0.9671 | 0.9515 | 0.9757   |
+| 0.04          | 7.0   | 4284 | 0.1053          | 0.9378    | 0.9694 | 0.9533 | 0.9764   |
+| 0.0373        | 8.0   | 4896 | 0.1106          | 0.9362    | 0.9699 | 0.9527 | 0.9759   |
+| 0.0303        | 9.0   | 5508 | 0.1109          | 0.9388    | 0.9683 | 0.9533 | 0.9766   |
+| 0.028         | 10.0  | 6120 | 0.1121          | 0.9407    | 0.9660 | 0.9532 | 0.9766   |
+
+
+### Framework versions
+
+- Transformers 4.45.1
+- Pytorch 2.4.0
+- Datasets 3.0.1
+- Tokenizers 0.20.0

config.json

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+{
+  "_name_or_path": "bert-base-uncased",
+  "architectures": [
+    "BertForTokenClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "gradient_checkpointing": false,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "id2label": {
+    "0": "LABEL_0",
+    "1": "LABEL_1",
+    "2": "LABEL_2",
+    "3": "LABEL_3",
+    "4": "LABEL_4",
+    "5": "LABEL_5",
+    "6": "LABEL_6",
+    "7": "LABEL_7",
+    "8": "LABEL_8",
+    "9": "LABEL_9",
+    "10": "LABEL_10",
+    "11": "LABEL_11",
+    "12": "LABEL_12",
+    "13": "LABEL_13",
+    "14": "LABEL_14",
+    "15": "LABEL_15",
+    "16": "LABEL_16",
+    "17": "LABEL_17",
+    "18": "LABEL_18",
+    "19": "LABEL_19",
+    "20": "LABEL_20",
+    "21": "LABEL_21",
+    "22": "LABEL_22",
+    "23": "LABEL_23",
+    "24": "LABEL_24",
+    "25": "LABEL_25",
+    "26": "LABEL_26",
+    "27": "LABEL_27",
+    "28": "LABEL_28",
+    "29": "LABEL_29"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "label2id": {
+    "LABEL_0": 0,
+    "LABEL_1": 1,
+    "LABEL_10": 10,
+    "LABEL_11": 11,
+    "LABEL_12": 12,
+    "LABEL_13": 13,
+    "LABEL_14": 14,
+    "LABEL_15": 15,
+    "LABEL_16": 16,
+    "LABEL_17": 17,
+    "LABEL_18": 18,
+    "LABEL_19": 19,
+    "LABEL_2": 2,
+    "LABEL_20": 20,
+    "LABEL_21": 21,
+    "LABEL_22": 22,
+    "LABEL_23": 23,
+    "LABEL_24": 24,
+    "LABEL_25": 25,
+    "LABEL_26": 26,
+    "LABEL_27": 27,
+    "LABEL_28": 28,
+    "LABEL_29": 29,
+    "LABEL_3": 3,
+    "LABEL_4": 4,
+    "LABEL_5": 5,
+    "LABEL_6": 6,
+    "LABEL_7": 7,
+    "LABEL_8": 8,
+    "LABEL_9": 9
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 512,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "torch_dtype": "float32",
+  "transformers_version": "4.45.1",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 30522
+}

model.safetensors

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special_tokens_map.json

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+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer_config.json

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+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "100": {
+      "content": "[UNK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "101": {
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+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
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+      "special": true
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+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": false,
+  "cls_token": "[CLS]",
+  "do_lower_case": true,
+  "mask_token": "[MASK]",
+  "model_max_length": 512,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

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